SMTL ID : 8aav.1

Human heavy chain ferritin with introduced Cys residues modified with C10 ligand

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-24-mer

Ligands

48 x O3K: 2-bromanyl-N-decyl-ethanamide(Covalent)

O3K.1: 5 residues within 4Å: Chain A: C.64, E.67, K.68, K.71 Chain F: Y.39 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.67, A:K.71 O3K.2: 5 residues within 4Å: Chain A: S.38, Y.39, A.52, C.53, L.56 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.39, A:A.52 O3K.6: 4 residues within 4Å: Chain B: C.64, E.67, K.68, K.71 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:E.67, B:K.68, B:K.71 Hydrogen bonds: B:E.67 O3K.7: 6 residues within 4Å: Chain B: S.38, Y.39, D.42, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:Y.39, B:D.42, B:A.52 O3K.12: 4 residues within 4Å: Chain C: C.64, E.67, K.68, K.71 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:E.67, C:K.71 Hydrogen bonds: C:E.67, C:E.67 O3K.13: 5 residues within 4Å: Chain C: S.38, Y.39, A.52, C.53, L.56 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:Y.39, C:A.52, C:L.56 Water bridges: C:C.53 O3K.17: 4 residues within 4Å: Chain D: C.64, E.67, K.68, K.71 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:E.67, D:K.71 Hydrogen bonds: D:E.67, D:E.67 O3K.18: 7 residues within 4Å: Chain D: S.38, Y.39, D.42, K.49, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain D Hydrophobic interactions: D:Y.39, D:A.52 Water bridges: D:C.53 O3K.20: 4 residues within 4Å: Chain E: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:K.71 Hydrogen bonds: E:E.67, E:E.67 O3K.21: 6 residues within 4Å: Chain E: S.38, Y.39, D.42, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain E Hydrophobic interactions: E:Y.39, E:D.42, E:A.52 O3K.25: 4 residues within 4Å: Chain F: C.64, E.67, K.68, K.71 5 PLIP interactions: 5 interactions with chain F Hydrophobic interactions: F:E.67, F:K.68, F:K.71 Hydrogen bonds: F:E.67, F:E.67 O3K.26: 7 residues within 4Å: Chain F: S.38, Y.39, D.42, K.49, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:Y.39, F:D.42, F:A.52 O3K.31: 5 residues within 4Å: Chain D: Y.39 Chain G: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain G Hydrophobic interactions: G:E.67, G:K.71 Hydrogen bonds: G:E.67 O3K.32: 6 residues within 4Å: Chain G: S.38, Y.39, D.42, A.52, C.53, L.56 4 PLIP interactions: 4 interactions with chain G Hydrophobic interactions: G:Y.39, G:D.42, G:A.52 Water bridges: G:C.53 O3K.36: 4 residues within 4Å: Chain H: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain H Hydrophobic interactions: H:E.67, H:K.71 Hydrogen bonds: H:E.67 O3K.37: 5 residues within 4Å: Chain H: S.38, Y.39, A.52, C.53, L.56 5 PLIP interactions: 5 interactions with chain H Hydrophobic interactions: H:Y.39, H:A.52, H:L.56 Water bridges: H:K.49, H:C.53 O3K.40: 5 residues within 4Å: Chain I: C.64, E.67, K.68, K.71 Chain N: Y.39 3 PLIP interactions: 3 interactions with chain I Hydrophobic interactions: I:E.67, I:K.71 Hydrogen bonds: I:E.67 O3K.41: 5 residues within 4Å: Chain I: S.38, Y.39, A.52, C.53, L.56 2 PLIP interactions: 2 interactions with chain I Hydrophobic interactions: I:Y.39, I:A.52 O3K.45: 4 residues within 4Å: Chain J: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain J Hydrophobic interactions: J:E.67, J:K.68, J:K.71 O3K.46: 6 residues within 4Å: Chain J: S.38, Y.39, D.42, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain J Hydrophobic interactions: J:Y.39, J:D.42, J:A.52 O3K.51: 4 residues within 4Å: Chain K: C.64, E.67, K.68, K.71 4 PLIP interactions: 4 interactions with chain K Hydrophobic interactions: K:E.67, K:K.71 Hydrogen bonds: K:E.67, K:E.67 O3K.52: 5 residues within 4Å: Chain K: S.38, Y.39, A.52, C.53, L.56 4 PLIP interactions: 4 interactions with chain K Hydrophobic interactions: K:Y.39, K:A.52, K:L.56 Water bridges: K:C.53 O3K.56: 4 residues within 4Å: Chain L: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain L Hydrophobic interactions: L:E.67, L:K.71 Hydrogen bonds: L:E.67 O3K.57: 7 residues within 4Å: Chain L: S.38, Y.39, D.42, K.49, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain L Hydrophobic interactions: L:Y.39, L:A.52 Water bridges: L:C.53 O3K.59: 4 residues within 4Å: Chain M: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain M Hydrophobic interactions: M:K.71 Hydrogen bonds: M:E.67, M:E.67 O3K.60: 6 residues within 4Å: Chain M: S.38, Y.39, D.42, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain M Hydrophobic interactions: M:Y.39, M:D.42, M:A.52 O3K.64: 4 residues within 4Å: Chain N: C.64, E.67, K.68, K.71 5 PLIP interactions: 5 interactions with chain N Hydrophobic interactions: N:E.67, N:K.68, N:K.71 Hydrogen bonds: N:E.67, N:E.67 O3K.65: 7 residues within 4Å: Chain N: S.38, Y.39, D.42, K.49, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain N Hydrophobic interactions: N:Y.39, N:D.42, N:A.52 O3K.70: 5 residues within 4Å: Chain L: Y.39 Chain O: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain O Hydrophobic interactions: O:E.67, O:K.71 Hydrogen bonds: O:E.67 O3K.71: 6 residues within 4Å: Chain O: S.38, Y.39, D.42, A.52, C.53, L.56 4 PLIP interactions: 4 interactions with chain O Hydrophobic interactions: O:Y.39, O:D.42, O:A.52 Water bridges: O:C.53 O3K.75: 4 residues within 4Å: Chain P: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain P Hydrophobic interactions: P:E.67, P:K.71 Hydrogen bonds: P:E.67 O3K.76: 5 residues within 4Å: Chain P: S.38, Y.39, A.52, C.53, L.56 5 PLIP interactions: 5 interactions with chain P Hydrophobic interactions: P:Y.39, P:A.52, P:L.56 Water bridges: P:K.49, P:C.53 O3K.79: 5 residues within 4Å: Chain Q: C.64, E.67, K.68, K.71 Chain V: Y.39 2 PLIP interactions: 2 interactions with chain Q Hydrophobic interactions: Q:E.67, Q:K.71 O3K.80: 5 residues within 4Å: Chain Q: S.38, Y.39, A.52, C.53, L.56 2 PLIP interactions: 2 interactions with chain Q Hydrophobic interactions: Q:Y.39, Q:A.52 O3K.84: 4 residues within 4Å: Chain R: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain R Hydrophobic interactions: R:E.67, R:K.68, R:K.71 O3K.85: 6 residues within 4Å: Chain R: S.38, Y.39, D.42, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain R Hydrophobic interactions: R:Y.39, R:D.42, R:A.52 O3K.90: 4 residues within 4Å: Chain S: C.64, E.67, K.68, K.71 4 PLIP interactions: 4 interactions with chain S Hydrophobic interactions: S:E.67, S:K.71 Hydrogen bonds: S:E.67, S:E.67 O3K.91: 5 residues within 4Å: Chain S: S.38, Y.39, A.52, C.53, L.56 4 PLIP interactions: 4 interactions with chain S Hydrophobic interactions: S:Y.39, S:A.52, S:L.56 Water bridges: S:C.53 O3K.95: 4 residues within 4Å: Chain T: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain T Hydrophobic interactions: T:E.67, T:K.71 Hydrogen bonds: T:E.67 O3K.96: 7 residues within 4Å: Chain T: S.38, Y.39, D.42, K.49, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain T Hydrophobic interactions: T:Y.39, T:A.52 Water bridges: T:C.53 O3K.98: 4 residues within 4Å: Chain U: C.64, E.67, K.68, K.71 2 PLIP interactions: 2 interactions with chain U Hydrophobic interactions: U:K.71 Hydrogen bonds: U:E.67 O3K.99: 6 residues within 4Å: Chain U: S.38, Y.39, D.42, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain U Hydrophobic interactions: U:Y.39, U:D.42, U:A.52 O3K.103: 4 residues within 4Å: Chain V: C.64, E.67, K.68, K.71 4 PLIP interactions: 4 interactions with chain V Hydrophobic interactions: V:E.67, V:K.68, V:K.71 Hydrogen bonds: V:E.67 O3K.104: 7 residues within 4Å: Chain V: S.38, Y.39, D.42, K.49, A.52, C.53, L.56 3 PLIP interactions: 3 interactions with chain V Hydrophobic interactions: V:Y.39, V:D.42, V:A.52 O3K.109: 5 residues within 4Å: Chain T: Y.39 Chain W: C.64, E.67, K.68, K.71 2 PLIP interactions: 2 interactions with chain W Hydrophobic interactions: W:E.67, W:K.71 O3K.110: 6 residues within 4Å: Chain W: S.38, Y.39, D.42, A.52, C.53, L.56 4 PLIP interactions: 4 interactions with chain W Hydrophobic interactions: W:Y.39, W:D.42, W:A.52 Water bridges: W:C.53 O3K.114: 4 residues within 4Å: Chain X: C.64, E.67, K.68, K.71 3 PLIP interactions: 3 interactions with chain X Hydrophobic interactions: X:E.67, X:K.71 Hydrogen bonds: X:E.67 O3K.115: 5 residues within 4Å: Chain X: S.38, Y.39, A.52, C.53, L.56 5 PLIP interactions: 5 interactions with chain X Hydrophobic interactions: X:Y.39, X:A.52, X:L.56 Water bridges: X:K.49, X:C.53

24 x FE: FE (III) ION(Non-covalent)

FE.3: 3 residues within 4Å: Chain A: E.27, E.62, H.65 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.27, A:E.62, A:H.65, H2O.1, H2O.1 FE.8: 4 residues within 4Å: Chain B: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.27, B:E.62, B:H.65, H2O.6, H2O.6 FE.14: 4 residues within 4Å: Chain C: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:E.27, C:E.62, C:H.65, H2O.12, H2O.13 FE.19: 3 residues within 4Å: Chain D: E.27, E.62, H.65 5 PLIP interactions: 3 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:E.27, D:E.62, D:H.65, H2O.17, H2O.17 FE.22: 4 residues within 4Å: Chain E: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:E.27, E:E.62, E:H.65, H2O.22, H2O.23 FE.27: 4 residues within 4Å: Chain F: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.27, F:E.62, F:H.65, H2O.26, H2O.27 FE.33: 4 residues within 4Å: Chain G: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:E.27, G:E.62, G:H.65, H2O.32, H2O.32 FE.38: 4 residues within 4Å: Chain H: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain H, 2 Ligand-Water interactions Metal complexes: H:E.27, H:E.62, H:H.65, H2O.37, H2O.38 FE.42: 3 residues within 4Å: Chain I: E.27, E.62, H.65 5 PLIP interactions: 3 interactions with chain I, 2 Ligand-Water interactions Metal complexes: I:E.27, I:E.62, I:H.65, H2O.42, H2O.43 FE.47: 4 residues within 4Å: Chain J: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:E.27, J:E.62, J:H.65, H2O.47, H2O.48 FE.53: 4 residues within 4Å: Chain K: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:E.27, K:E.62, K:H.65, H2O.53, H2O.54 FE.58: 3 residues within 4Å: Chain L: E.27, E.62, H.65 5 PLIP interactions: 3 interactions with chain L, 2 Ligand-Water interactions Metal complexes: L:E.27, L:E.62, L:H.65, H2O.58, H2O.58 FE.61: 4 residues within 4Å: Chain M: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain M, 2 Ligand-Water interactions Metal complexes: M:E.27, M:E.62, M:H.65, H2O.63, H2O.64 FE.66: 4 residues within 4Å: Chain N: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:E.27, N:E.62, N:H.65, H2O.68, H2O.69 FE.72: 4 residues within 4Å: Chain O: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:E.27, O:E.62, O:H.65, H2O.74, H2O.74 FE.77: 4 residues within 4Å: Chain P: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain P, 2 Ligand-Water interactions Metal complexes: P:E.27, P:E.62, P:H.65, H2O.79, H2O.79 FE.81: 3 residues within 4Å: Chain Q: E.27, E.62, H.65 5 PLIP interactions: 3 interactions with chain Q, 2 Ligand-Water interactions Metal complexes: Q:E.27, Q:E.62, Q:H.65, H2O.83, H2O.84 FE.86: 4 residues within 4Å: Chain R: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:E.27, R:E.62, R:H.65, H2O.89, H2O.89 FE.92: 4 residues within 4Å: Chain S: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:E.27, S:E.62, S:H.65, H2O.95, H2O.96 FE.97: 3 residues within 4Å: Chain T: E.27, E.62, H.65 5 PLIP interactions: 3 interactions with chain T, 2 Ligand-Water interactions Metal complexes: T:E.27, T:E.62, T:H.65, H2O.100, H2O.100 FE.100: 4 residues within 4Å: Chain U: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain U, 2 Ligand-Water interactions Metal complexes: U:E.27, U:E.62, U:H.65, H2O.104, H2O.106 FE.105: 4 residues within 4Å: Chain V: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:E.27, V:E.62, V:H.65, H2O.109, H2O.110 FE.111: 4 residues within 4Å: Chain W: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:E.27, W:E.62, W:H.65, H2O.115, H2O.115 FE.116: 4 residues within 4Å: Chain X: E.27, E.62, H.65, Q.141 5 PLIP interactions: 3 interactions with chain X, 2 Ligand-Water interactions Metal complexes: X:E.27, X:E.62, X:H.65, H2O.120, H2O.121

45 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 3 residues within 4Å: Chain A: E.134 Chain C: E.134 Chain D: E.134 No protein-ligand interaction detected (PLIP) MG.5: 4 residues within 4Å: Chain A: Q.58, E.61, E.62, E.107 No protein-ligand interaction detected (PLIP) MG.9: 5 residues within 4Å: Chain B: E.134 Chain J: E.134 Chain R: E.134 Ligands: MG.48, MG.87 No protein-ligand interaction detected (PLIP) MG.10: 1 residues within 4Å: Chain B: D.84 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.84, H2O.7, H2O.79 MG.11: 1 residues within 4Å: Chain B: Q.58 No protein-ligand interaction detected (PLIP) MG.15: 1 residues within 4Å: Chain C: Q.58 No protein-ligand interaction detected (PLIP) MG.16: 1 residues within 4Å: Chain C: D.84 3 PLIP interactions: 1 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:D.84, H2O.14, H2O.22 MG.23: 5 residues within 4Å: Chain E: E.134 Chain M: E.134 Chain U: E.134 Ligands: MG.62, MG.101 No protein-ligand interaction detected (PLIP) MG.24: 1 residues within 4Å: Chain E: Q.58 No protein-ligand interaction detected (PLIP) MG.28: 3 residues within 4Å: Chain F: E.134 Chain H: E.134 Chain W: E.134 No protein-ligand interaction detected (PLIP) MG.29: 1 residues within 4Å: Chain F: D.84 3 PLIP interactions: 1 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:D.84, H2O.1, H2O.29 MG.30: 3 residues within 4Å: Chain F: Q.58, E.61, E.140 4 PLIP interactions: 1 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:E.61, H2O.27, H2O.27, H2O.29 MG.34: 1 residues within 4Å: Chain G: D.84 3 PLIP interactions: 1 interactions with chain G, 2 Ligand-Water interactions Metal complexes: G:D.84, H2O.17, H2O.35 MG.35: 3 residues within 4Å: Chain G: Q.58, E.61, E.140 5 PLIP interactions: 1 interactions with chain G, 4 Ligand-Water interactions Metal complexes: G:E.61, H2O.32, H2O.32, H2O.32, H2O.36 MG.39: 3 residues within 4Å: Chain H: Q.58, E.61, E.140 4 PLIP interactions: 1 interactions with chain H, 3 Ligand-Water interactions Metal complexes: H:E.61, H2O.37, H2O.39, H2O.41 MG.43: 3 residues within 4Å: Chain I: E.134 Chain K: E.134 Chain L: E.134 No protein-ligand interaction detected (PLIP) MG.44: 4 residues within 4Å: Chain I: Q.58, E.61, E.62, E.107 No protein-ligand interaction detected (PLIP) MG.48: 5 residues within 4Å: Chain B: E.134 Chain J: E.134 Chain R: E.134 Ligands: MG.9, MG.87 No protein-ligand interaction detected (PLIP) MG.49: 1 residues within 4Å: Chain J: D.84 3 PLIP interactions: 1 interactions with chain J, 2 Ligand-Water interactions Metal complexes: J:D.84, H2O.49, H2O.121 MG.50: 1 residues within 4Å: Chain J: Q.58 No protein-ligand interaction detected (PLIP) MG.54: 1 residues within 4Å: Chain K: Q.58 No protein-ligand interaction detected (PLIP) MG.55: 1 residues within 4Å: Chain K: D.84 3 PLIP interactions: 1 interactions with chain K, 2 Ligand-Water interactions Metal complexes: K:D.84, H2O.55, H2O.64 MG.62: 5 residues within 4Å: Chain E: E.134 Chain M: E.134 Chain U: E.134 Ligands: MG.23, MG.101 No protein-ligand interaction detected (PLIP) MG.63: 1 residues within 4Å: Chain M: Q.58 No protein-ligand interaction detected (PLIP) MG.67: 3 residues within 4Å: Chain G: E.134 Chain N: E.134 Chain P: E.134 No protein-ligand interaction detected (PLIP) MG.68: 1 residues within 4Å: Chain N: D.84 3 PLIP interactions: 1 interactions with chain N, 2 Ligand-Water interactions Metal complexes: N:D.84, H2O.42, H2O.70 MG.69: 3 residues within 4Å: Chain N: Q.58, E.61, E.140 4 PLIP interactions: 1 interactions with chain N, 3 Ligand-Water interactions Metal complexes: N:E.61, H2O.68, H2O.69, H2O.71 MG.73: 1 residues within 4Å: Chain O: D.84 3 PLIP interactions: 1 interactions with chain O, 2 Ligand-Water interactions Metal complexes: O:D.84, H2O.58, H2O.76 MG.74: 3 residues within 4Å: Chain O: Q.58, E.61, E.140 5 PLIP interactions: 1 interactions with chain O, 4 Ligand-Water interactions Metal complexes: O:E.61, H2O.73, H2O.73, H2O.73, H2O.77 MG.78: 3 residues within 4Å: Chain P: Q.58, E.61, E.140 4 PLIP interactions: 1 interactions with chain P, 3 Ligand-Water interactions Metal complexes: P:E.61, H2O.79, H2O.80, H2O.82 MG.82: 3 residues within 4Å: Chain Q: E.134 Chain S: E.134 Chain T: E.134 No protein-ligand interaction detected (PLIP) MG.83: 4 residues within 4Å: Chain Q: Q.58, E.61, E.62, E.107 No protein-ligand interaction detected (PLIP) MG.87: 5 residues within 4Å: Chain B: E.134 Chain J: E.134 Chain R: E.134 Ligands: MG.9, MG.48 No protein-ligand interaction detected (PLIP) MG.88: 1 residues within 4Å: Chain R: D.84 3 PLIP interactions: 1 interactions with chain R, 2 Ligand-Water interactions Metal complexes: R:D.84, H2O.38, H2O.90 MG.89: 1 residues within 4Å: Chain R: Q.58 No protein-ligand interaction detected (PLIP) MG.93: 1 residues within 4Å: Chain S: Q.58 No protein-ligand interaction detected (PLIP) MG.94: 1 residues within 4Å: Chain S: D.84 3 PLIP interactions: 1 interactions with chain S, 2 Ligand-Water interactions Metal complexes: S:D.84, H2O.97, H2O.105 MG.101: 5 residues within 4Å: Chain E: E.134 Chain M: E.134 Chain U: E.134 Ligands: MG.23, MG.62 No protein-ligand interaction detected (PLIP) MG.102: 1 residues within 4Å: Chain U: Q.58 No protein-ligand interaction detected (PLIP) MG.106: 3 residues within 4Å: Chain O: E.134 Chain V: E.134 Chain X: E.134 No protein-ligand interaction detected (PLIP) MG.107: 1 residues within 4Å: Chain V: D.84 3 PLIP interactions: 1 interactions with chain V, 2 Ligand-Water interactions Metal complexes: V:D.84, H2O.84, H2O.111 MG.108: 3 residues within 4Å: Chain V: Q.58, E.61, E.140 4 PLIP interactions: 1 interactions with chain V, 3 Ligand-Water interactions Metal complexes: V:E.61, H2O.109, H2O.110, H2O.112 MG.112: 1 residues within 4Å: Chain W: D.84 3 PLIP interactions: 1 interactions with chain W, 2 Ligand-Water interactions Metal complexes: W:D.84, H2O.100, H2O.118 MG.113: 3 residues within 4Å: Chain W: Q.58, E.61, E.140 5 PLIP interactions: 1 interactions with chain W, 4 Ligand-Water interactions Metal complexes: W:E.61, H2O.115, H2O.115, H2O.115, H2O.119 MG.117: 3 residues within 4Å: Chain X: Q.58, E.61, E.140 4 PLIP interactions: 1 interactions with chain X, 3 Ligand-Water interactions Metal complexes: X:E.61, H2O.120, H2O.121, H2O.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bohler, H. et al., Assembly of chemically modified protein nanocages into 3D materials for the adsorption of uremic toxins. J Mater Chem B (2022)

Release Date

2024-03-20

Peptides

Ferritin heavy chain, N-terminally processed: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
A

J
B

K
C

L
D

M
E

N
F

O
G

P
H

Q
A

R
B

S
C

T
D

U
E

V
F

W
G

X
H

Ferritin heavy chain, N-terminally processed