SMTL ID : 8acr.1

Structure of Pseudomonas aeruginosa aminopeptidase, PaAP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.282, E.315, Y.440, H.441 Ligands: ZN.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.282, A:E.315, A:E.315, A:H.441, H2O.6 ZN.2: 5 residues within 4Å: Chain A: H.270, D.282, E.315, D.343 Ligands: ZN.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.270, A:D.282, A:D.343, A:D.343, H2O.6 ZN.3: 4 residues within 4Å: Chain A: D.356, D.358, S.360, E.374 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.356, A:D.358, A:S.360, H2O.1, H2O.2

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: D.137, T.147, E.151, D.154 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:C.150, A:D.154 Water bridges: A:D.154

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harding, C.J. et al., An anti-biofilm cyclic peptide targets a secreted aminopeptidase from P. aeruginosa. Nat.Chem.Biol. (2023)

Release Date

2023-07-12

Peptides

Keratinase KP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Keratinase KP1