SMTL ID : 8adf.1

X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ39

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

homo-dimer

Ligands

2 x LRA: (2R)-3-(4-bromophenyl)-2-(3-hydroxyphenyl)-4-oxidanyl-2H-furan-5-one(Non-covalent)

LRA.1: 9 residues within 4Å: Chain A: G.111, C.112, R.115, L.157, V.166, I.168, M.175, L.180, M.191 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.157, A:I.168 Hydrogen bonds: A:R.115, A:R.115 LRA.2: 9 residues within 4Å: Chain B: L.82, R.107, I.108, G.111, C.112, I.168, S.169, M.175, M.191 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:L.82, B:I.108, B:I.108, B:I.168 Hydrogen bonds: B:R.107, B:S.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Capelli, D. et al., Biological Screening and Crystallographic Studies of Hydroxy gamma-Lactone Derivatives to Investigate PPAR gamma Phosphorylation Inhibition. Biomolecules (2023)

Release Date

2023-04-26

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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