SMTL ID : 8adk.1 (2 other biounits)

Poly(ADP-ribose) glycohydrolase (PARG) from Drosophila melanogaster

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

monomer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: W.100, R.106, R.238 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.106, A:R.106, A:R.238, A:R.238 GOL.2: 2 residues within 4Å: Chain A: H.307, W.460 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.460 GOL.3: 4 residues within 4Å: Chain A: F.251, P.252, D.253 Ligands: SO4.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.253, A:D.253

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 6 residues within 4Å: Chain A: Y.158, R.238, R.239, N.240, T.241 Ligands: CL.7 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.158, A:R.238, A:N.240, A:N.240, A:T.241 SO4.5: 6 residues within 4Å: Chain A: R.239, T.241, Y.248, F.251, P.252 Ligands: GOL.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.246, A:Y.248

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 2 residues within 4Å: Chain A: R.117, R.135 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain A: P.237, R.238 Ligands: SO4.4 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fontana, P. et al., Serine ADP-ribosylation in Drosophila provides insights into the evolution of reversible ADP-ribosylation signalling. Nat Commun (2023)

Release Date

2023-06-14

Peptides

Poly(ADP-ribose) glycohydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Poly(ADP-ribose) glycohydrolase

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