SMTL ID : 8ae4.1

Crystal structure of human legumain in complex with Clitocypin 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 1 residues within 4Å: Chain A: N.66 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain A: N.142, H.172, P.174, I.177 No protein-ligand interaction detected (PLIP) NAG.3: 5 residues within 4Å: Chain A: K.156, D.175, N.176, N.247, T.249 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:N.176 Hydrogen bonds: A:N.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elamin, T. et al., Structural and functional studies of legumain-mycocypin complexes revealed a competitive, exosite-regulated mode of interaction. J.Biol.Chem. (2022)

Release Date

2022-09-28

Peptides

Legumain: A
Clitocypin-2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Legumain

Clitocypin-2

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