SMTL ID : 8aet.1

Malonyl-CoA reductase from Chloroflexus aurantiacus - C-terminal E779W variant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

10 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: G.490, D.491, F.515, E.545, H.546, H.550, R.553 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.490, A:E.545, A:E.545, A:R.553 Water bridges: A:R.553 Salt bridges: A:H.546, A:H.550 SO4.2: 7 residues within 4Å: Chain A: H.437, L.438, T.439, E.440, H.441, E.572, R.632 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.439, A:E.440, A:E.440, A:H.441, A:E.572, A:R.632 Water bridges: A:T.439, A:T.439 Salt bridges: A:H.441 SO4.3: 7 residues within 4Å: Chain A: P.418, S.419, R.422, H.663 Chain B: F.415, G.416, E.641 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.419, A:S.419, A:S.419, B:F.415 Salt bridges: A:R.422, A:H.663 Water bridges: B:R.638 SO4.4: 4 residues within 4Å: Chain A: R.55, D.90, S.92, H.137 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.92 Water bridges: A:R.55, A:R.55, A:S.92 Salt bridges: A:R.55, A:H.137 SO4.5: 5 residues within 4Å: Chain A: S.265, M.266, H.267, Y.330, V.331 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:M.266, A:H.267, A:V.331 Water bridges: A:G.329 SO4.6: 7 residues within 4Å: Chain B: G.490, D.491, F.515, E.545, H.546, H.550, R.553 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.490, B:E.545, B:R.553 Water bridges: B:R.553 Salt bridges: B:H.546, B:H.550 SO4.7: 7 residues within 4Å: Chain B: H.437, L.438, T.439, E.440, H.441, E.572, R.632 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:T.439, B:E.440, B:H.441, B:E.572, B:R.632 Water bridges: B:T.439 Salt bridges: B:H.441 SO4.8: 7 residues within 4Å: Chain A: F.415, G.416, E.641 Chain B: P.418, S.419, R.422, H.663 7 PLIP interactions: 2 interactions with chain A, 5 interactions with chain B Hydrogen bonds: A:F.415, B:S.419, B:S.419, B:S.419 Water bridges: A:R.638 Salt bridges: B:R.422, B:H.663 SO4.9: 4 residues within 4Å: Chain B: R.55, D.90, S.92, H.137 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:S.92 Water bridges: B:R.55, B:R.55, B:S.92 Salt bridges: B:R.55, B:H.137 SO4.10: 5 residues within 4Å: Chain B: S.265, M.266, H.267, Y.330, V.331 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:M.266, B:H.267, B:V.331 Water bridges: B:G.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kabasakal, B.V. et al., Dynamic lid domain of Chloroflexus aurantiacus Malonyl-CoA reductase controls the reaction. Biochimie (2023)

Release Date

2023-04-05

Peptides

Short-chain dehydrogenase/reductase SDR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Short-chain dehydrogenase/reductase SDR