SMTL ID : 8af0.1

Crystal structure of human angiogenin and RNA duplex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain C: Y.14, N.49, K.50, R.51 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:Y.14, C:K.50, C:R.51 GOL.2: 4 residues within 4Å: Chain C: C.57, E.58, N.59 Ligands: GOL.4 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:E.58, C:E.58, C:N.59, C:N.59 GOL.3: 2 residues within 4Å: Chain C: R.121, P.123 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.82, C:R.121 GOL.4: 7 residues within 4Å: Chain C: C.57, E.58, C.107, E.108, N.109, G.110 Ligands: GOL.2 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:E.58, C:C.107, C:N.109, C:G.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sievers, K. et al., Structure of angiogenin dimer bound to double-stranded RNA. Acta Crystallogr.,Sect.F (2022)

Release Date

2022-09-14

Peptides

Angiogenin: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

D
B

Angiogenin