SMTL ID : 8afg.1

K352D oxalyl-CoA synthetase Pcs60p

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.147, A.172, K.173 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.173 Salt bridges: A:R.147 SO4.2: 4 residues within 4Å: Chain A: N.93, Y.96, F.240, H.241 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.93, A:Y.96 Salt bridges: A:H.241 SO4.3: 9 residues within 4Å: Chain A: K.205, M.336, E.338, Y.395, N.405, F.413, R.414, T.415, R.432 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.395, A:N.405, A:T.415 Salt bridges: A:K.205, A:R.432 SO4.4: 3 residues within 4Å: Chain B: R.147, A.172, K.173 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.173 Salt bridges: B:R.147 SO4.5: 3 residues within 4Å: Chain B: N.93, Y.96, H.241 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.93, B:Y.96 Water bridges: B:N.93 Salt bridges: B:H.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgi, J. et al., Asymmetric horseshoe-like assembly of peroxisomal yeast oxalyl-CoA synthetase. Biol.Chem. (2023)

Release Date

2023-02-08

Peptides

Oxalate--CoA ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oxalate--CoA ligase

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