SMTL ID : 8ag2.1

Crystal structure of the BPTF bromodomain in complex with BI-7190

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

monomer

Ligands

1 x M1I: 5-[3-methoxy-4-[1-(4-methylpiperazin-1-yl)cyclopropyl]phenyl]-1,3,4-trimethyl-pyridin-2-one(Non-covalent)

M1I.1: 12 residues within 4Å: Chain A: W.34, P.35, F.36, V.40, D.41, D.44, A.45, Y.48, C.87, Y.90, N.91, F.97 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.34, A:D.44, A:A.45, A:Y.90, A:F.97 Hydrogen bonds: A:N.91 Salt bridges: A:D.41, A:D.44, A:D.44 pi-Stacking: A:F.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martinelli, P. et al., Discovery of a Chemical Probe to Study Implications of BPTF Bromodomain Inhibition in Cellular and in vivo Experiments. Chemmedchem (2023)

Release Date

2022-08-31

Peptides

Nucleosome-remodeling factor subunit BPTF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleosome-remodeling factor subunit BPTF