SMTL ID : 8ak2.1

Drosophila melanogaster UNC89 Protein Kinase Domain 1 (apo)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

8 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: L.45, L.48, Y.66, D.67, V.72 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.66 GOL.2: 5 residues within 4Å: Chain A: T.13, Y.160, G.161, W.286 Ligands: GOL.5 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.161 Water bridges: A:T.13, A:D.159 GOL.3: 8 residues within 4Å: Chain A: T.17, A.30, E.77, L.78, A.79, G.82, L.130 Ligands: GOL.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.77, A:A.79 Water bridges: A:T.17 GOL.4: 7 residues within 4Å: Chain A: L.9, A.80, G.81, G.82, R.86, D.87 Ligands: GOL.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.80 GOL.5: 5 residues within 4Å: Chain A: Y.160, G.161, V.170, L.208 Ligands: GOL.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.161 GOL.6: 3 residues within 4Å: Chain A: L.200, N.278, Y.279 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Y.279, A:H.282 GOL.7: 4 residues within 4Å: Chain A: D.99, H.102, Y.103, D.137 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.103, A:D.137, A:D.137 Water bridges: A:D.99, A:Y.103 GOL.8: 3 residues within 4Å: Chain A: L.48, E.49, N.52 2 PLIP interactions: 2 interactions with chain A Water bridges: A:L.45, A:E.49

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.9: 8 residues within 4Å: Chain A: G.10, R.11, E.83, R.86, K.127, Y.280, R.284, Y.287 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.11, A:Y.280, A:Y.280 Water bridges: A:E.83, A:E.83, A:R.284 TRS.10: 5 residues within 4Å: Chain A: R.152, N.177, F.178, S.179, D.247 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.152, A:R.152, A:N.177, A:S.179, A:S.179 Water bridges: A:S.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zacharchenko, T. et al., PK1 from Drosophila obscurin is an inactive pseudokinase with scaffolding properties. Open Biology (2023)

Release Date

2023-03-29

Peptides

Obscurin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Obscurin

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