SMTL ID : 8ak3.1

Drosophila melanogaster UNC89 Protein Kinase 1 in complex with ADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Covalent)

ADP.1: 23 residues within 4Å: Chain A: L.9, G.10, R.11, G.12, T.13, Q.14, G.15, T.17, A.30, K.32, E.47, I.60, M.76, E.77, L.78, A.79, E.83, R.86, K.127, D.128, L.130, D.143 Ligands: GOL.2 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.12, A:T.13, A:T.13, A:Q.14, A:G.15, A:T.17, A:E.77, A:A.79, A:E.83, A:R.86 Water bridges: A:G.12, A:G.12, A:Q.14, A:D.128, A:D.128, A:D.143 Salt bridges: A:K.32, A:K.32, A:K.127, A:K.127

5 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: G.10, R.11, E.83, R.86, K.127, Y.280, Y.287 Ligands: ADP.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.11, A:E.83, A:Y.280 Water bridges: A:E.83 GOL.3: 2 residues within 4Å: Chain A: L.45, Y.66 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.67, A:D.67 GOL.4: 4 residues within 4Å: Chain A: L.200, N.278, Y.279, H.282 4 PLIP interactions: 4 interactions with chain A Water bridges: A:G.195, A:N.278, A:Y.279, A:H.282 GOL.5: 1 residues within 4Å: Chain A: R.70 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.70, A:R.70 Water bridges: A:G.36 GOL.6: 8 residues within 4Å: Chain A: L.158, D.159, Y.160, G.161, V.166, V.170, L.208, N.294 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.161 Water bridges: A:L.158, A:D.159

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zacharchenko, T. et al., PK1 from Drosophila obscurin is an inactive pseudokinase with scaffolding properties. Open Biology (2023)

Release Date

2023-03-29

Peptides

Obscurin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Obscurin

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