SMTL ID : 8akp.1

Crystal structure of the catalytic domain of G7048 from Penicillium sumatraense

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-MAN-MAN.1: 12 residues within 4Å: Chain A: N.117, S.118, V.119, S.122, G.129, V.130, E.131, P.132, E.134, N.167, S.169, N.170 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.122, A:N.117, A:E.131, A:E.131

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 5 residues within 4Å: Chain A: F.203, D.204, V.207, E.208, L.254 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.204, A:D.204, A:E.208 Water bridges: A:K.200, A:K.200

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scafati, V. et al., Characterization of two 1,3-beta-glucan-modifying enzymes from Penicillium sumatraense reveals new insights into 1,3-beta-glucan metabolism of fungal saprotrophs. Biotechnol Biofuels Bioprod (2022)

Release Date

2022-12-28

Peptides

catalytic domain of G7048: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

catalytic domain of G7048