SMTL ID : 8anc.1

14-3-3 sigma sirtuin-3 phospho-peptide complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.11 Å

Oligo State

hetero-2-2-mer

Ligands

6 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: E.94 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:E.94, H2O.7, H2O.8, H2O.11, H2O.12 MG.2: 1 residues within 4Å: Chain A: E.7 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.7, H2O.2, H2O.9, H2O.14 MG.3: 2 residues within 4Å: Chain A: K.32, E.36 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.36, H2O.7, H2O.7, H2O.12 MG.7: 1 residues within 4Å: Chain C: E.94 5 PLIP interactions: 1 interactions with chain C, 4 Ligand-Water interactions Metal complexes: C:E.94, H2O.23, H2O.23, H2O.26, H2O.28 MG.8: 1 residues within 4Å: Chain C: E.7 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.7, H2O.17, H2O.24, H2O.29 MG.9: 2 residues within 4Å: Chain C: K.32, E.36 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.36, H2O.22, H2O.22, H2O.27

4 x CA: CALCIUM ION(Non-covalent)

CA.4: 2 residues within 4Å: Chain A: E.40, E.115 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.40, A:E.115, H2O.4, H2O.11, H2O.12 CA.5: 1 residues within 4Å: Chain A: E.166 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.166, H2O.11, H2O.11, H2O.14 CA.10: 2 residues within 4Å: Chain C: E.40, E.115 5 PLIP interactions: 2 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.40, C:E.115, H2O.19, H2O.26, H2O.28 CA.11: 1 residues within 4Å: Chain C: E.166 4 PLIP interactions: 1 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.166, H2O.26, H2O.27, H2O.30

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.6: 4 residues within 4Å: Chain A: E.88, Y.89, K.92 Chain C: K.14 Ligand excluded by PLIP CL.12: 4 residues within 4Å: Chain A: K.14 Chain C: E.88, Y.89, K.92 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Weyand, M. et al., 14-3-3 sigma sirtuin-3 phospho-peptide complex. To Be Published

Release Date

2023-08-16

Peptides

14-3-3 protein sigma: AC
NAD-dependent protein deacetylase sirtuin-3, mitochondrial: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
P

D
P

14-3-3 protein sigma

NAD-dependent protein deacetylase sirtuin-3, mitochondrial