SMTL ID : 8ans.1

Crystal structure of D1228V c-MET bound by compound 1.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: R.251, L.267, W.270, H.271, P.272 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.251, A:L.267

1 x MDI: 3-[bis(fluoranyl)methyl]-~{N}-methyl-~{N}-[(1~{R})-8-methyl-5-(3-methyl-1~{H}-indazol-6-yl)-1,2,3,4-tetrahydronaphthalen-1-yl]pyridine-2-carboxamide(Non-covalent)

MDI.2: 17 residues within 4Å: Chain A: I.34, F.39, V.42, A.58, K.60, E.70, V.71, S.72, L.75, L.107, P.108, Y.109, M.110, M.161, D.172, F.173, G.174 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.42, A:V.42, A:A.58, A:K.60, A:L.75, A:L.107, A:L.107, A:F.173 Hydrogen bonds: A:S.72, A:P.108, A:M.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Collie, G.W. et al., Discovery of a selective c-MET inhibitor with a novel binding mode. Bioorg.Med.Chem.Lett. (2022)

Release Date

2022-08-31

Peptides

Hepatocyte growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hepatocyte growth factor receptor