SMTL ID : 8avg.1

Cryo-EM structure of mouse Elp123 with bound SAM

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 9 residues within 4Å: Chain C: C.99, H.101, I.108, C.109, C.112, Q.125, S.126, R.223 Ligands: SAM.2 3 PLIP interactions: 3 interactions with chain C, Metal complexes: C:C.99, C:C.109, C:C.112

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.2: 14 residues within 4Å: Chain C: Y.111, C.112, P.113, S.126, E.221, Q.248, H.284, M.286, Y.318, P.319, T.320, L.321, R.367 Ligands: SF4.1 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:S.126, C:S.126, C:Q.248, C:H.284, C:L.321, C:L.321

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaciuk, M. et al., Cryo-EM structure of the fully assembled Elongator complex. Nucleic Acids Res. (2023)

Release Date

2022-12-07

Peptides

Elongator complex protein 1: A
Elongator complex protein 2: B
Elongator complex protein 3: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Elongator complex protein 1

Elongator complex protein 2

Elongator complex protein 3