SMTL ID : 8ayr.2 (1 other biounit)

Sialidases and Fucosidases of Akkermansia muciniphila are key for rapid growth on colonic mucin and nutrient sharing amongst mucin-associated human gut microbiota

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: L.584, D.587, D.589, T.592, A.697, E.698 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:L.584, A:D.589, A:T.592, A:A.697, A:E.698 CA.2: 6 residues within 4Å: Chain A: Q.385, V.386, D.388, K.390, T.393, C.483 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:Q.385, A:K.390, A:T.393, A:T.393, A:C.483

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shuoker, B. et al., Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria. Nat Commun (2023)

Release Date

2023-03-01

Peptides

Coagulation factor 5/8 type domain protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Coagulation factor 5/8 type domain protein

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