SMTL ID : 8b1u.1

RecBCD-DNA in complex with the phage protein Abc2 and host PpiB

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 14 residues within 4Å: Chain A: G.26, T.27, G.28, K.29, T.30, F.31, E.385, Q.417, W.447, R.448, G.746, E.748, R.808 Ligands: MG.2 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.26, A:T.27, A:T.27, A:G.28, A:K.29, A:K.29, A:K.29, A:T.30, A:F.31, A:Q.417, A:R.448, A:K.483, A:G.746, A:E.748, A:R.808, A:R.808 Salt bridges: A:R.448 pi-Stacking: A:W.447, A:W.447, A:W.447

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: T.30, E.385 Ligands: ANP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.30

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilkinson, M. et al., Structures of RecBCD in complex with phage-encoded inhibitor proteins reveal distinctive strategies for evasion of a bacterial immunity hub. Elife (2022)

Release Date

2022-12-28

Peptides

RecBCD enzyme subunit RecB: A
RecBCD enzyme subunit RecC: B
RecBCD enzyme subunit RecD: C
Anti-RecBCD protein 2: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

E
A

RecBCD enzyme subunit RecB

RecBCD enzyme subunit RecC

RecBCD enzyme subunit RecD

Anti-RecBCD protein 2

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