SMTL ID : 8b1v.1

Dihydroprecondylocarpine acetate synthase 2 from Tabernanthe iboga

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

homo-dimer

Ligands

2 x ORZ: precondylocarpine acetate(Non-covalent)

ORZ.1: 12 residues within 4Å: Chain A: T.54, S.58, Y.63, M.74, A.100, Y.101, N.117, V.122, I.124, Y.126, A.281, A.304 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.54, A:Y.63, A:Y.63, A:A.100, A:Y.101, A:V.122, A:I.124, A:I.124, A:Y.126 Water bridges: A:G.125 ORZ.3: 13 residues within 4Å: Chain A: I.291 Chain B: T.54, S.58, Y.63, M.74, A.100, Y.101, N.117, V.122, I.124, Y.126, A.281, A.304 11 PLIP interactions: 10 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:T.54, B:Y.63, B:Y.63, B:A.100, B:Y.101, B:V.122, B:I.124, B:I.124, B:Y.126, A:I.291 Water bridges: B:G.125

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: C.105, G.106, C.108, C.111, C.119 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.105, A:C.108, A:C.111, A:C.119 ZN.4: 5 residues within 4Å: Chain B: C.105, G.106, C.108, C.111, C.119 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.105, B:C.108, B:C.111, B:C.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Langley, C. et al., Expansion of the Catalytic Repertoire of Alcohol Dehydrogenases in Plant Metabolism. Angew.Chem.Int.Ed.Engl. (2022)

Release Date

2022-10-19

Peptides

Dihydroprecondylocarpine acetate synthase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dihydroprecondylocarpine acetate synthase 2

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