SMTL ID : 8b5f.1

Human cathepsin B in complex with the carbamate inhibitor 31

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x P9U: (2S)-2-[[(2S)-2-[[3-chloranyl-4-[[3-phenyl-2-(phenylmethyl)propanoyl]amino]phenoxy]carbonylamino]-3-cyclohexyl-propanoyl]amino]-3-phenyl-propanoic acid(Covalent)

P9U.1: 18 residues within 4Å: Chain A: Q.24, G.25, C.27, G.28, S.29, C.30, H.111, H.112, C.120, T.121, G.122, V.177, L.182, M.197, G.198, G.199, H.200, W.222 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:V.177, A:V.177, A:L.182, A:M.197, A:W.222 Hydrogen bonds: A:Q.24, A:C.30, A:H.200 Water bridges: A:H.111 Salt bridges: A:H.111, A:H.112

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: H.191, V.192, G.194 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rubesova, P. et al., Human cathepsin B in complex with the carbamate inhibitor 31. To Be Published

Release Date

2023-10-04

Peptides

Cathepsin B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin B

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