SMTL ID : 8b6v.1

Mp2Ba1 pre-pore

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-22-mer

Ligands

22 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:L.337, A:L.387, A:L.437 MG.2: 6 residues within 4Å: Chain B: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:L.337, B:L.387, B:L.437 MG.3: 6 residues within 4Å: Chain C: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:L.337, C:L.387, C:L.437 MG.4: 6 residues within 4Å: Chain D: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:L.337, D:L.387, D:L.437 MG.5: 6 residues within 4Å: Chain E: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:L.337, E:L.387, E:L.437 MG.6: 6 residues within 4Å: Chain F: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:L.337, F:L.387, F:L.437 MG.7: 6 residues within 4Å: Chain G: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain G Metal complexes: G:L.337, G:L.387, G:L.437 MG.8: 6 residues within 4Å: Chain H: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain H Metal complexes: H:L.337, H:L.387, H:L.437 MG.9: 6 residues within 4Å: Chain I: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain I Metal complexes: I:L.337, I:L.387, I:L.437 MG.10: 6 residues within 4Å: Chain J: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain J Metal complexes: J:L.337, J:L.387, J:L.437 MG.11: 6 residues within 4Å: Chain K: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain K Metal complexes: K:L.337, K:L.387, K:L.437 MG.12: 6 residues within 4Å: Chain L: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:L.337, L:L.387, L:L.437 MG.13: 6 residues within 4Å: Chain M: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain M Metal complexes: M:L.337, M:L.387, M:L.437 MG.14: 6 residues within 4Å: Chain N: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain N Metal complexes: N:L.337, N:L.387, N:L.437 MG.15: 6 residues within 4Å: Chain O: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain O Metal complexes: O:L.337, O:L.387, O:L.437 MG.16: 6 residues within 4Å: Chain P: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain P Metal complexes: P:L.337, P:L.387, P:L.437 MG.17: 6 residues within 4Å: Chain Q: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain Q Metal complexes: Q:L.337, Q:L.387, Q:L.437 MG.18: 6 residues within 4Å: Chain R: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain R Metal complexes: R:L.337, R:L.387, R:L.437 MG.19: 6 residues within 4Å: Chain S: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain S Metal complexes: S:L.337, S:L.387, S:L.437 MG.20: 6 residues within 4Å: Chain T: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain T Metal complexes: T:L.337, T:L.387, T:L.437 MG.21: 6 residues within 4Å: Chain U: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain U Metal complexes: U:L.337, U:L.387, U:L.437 MG.22: 6 residues within 4Å: Chain V: L.337, N.338, L.387, N.388, L.437, N.438 3 PLIP interactions: 3 interactions with chain V Metal complexes: V:L.337, V:L.387, V:L.437

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marini, G. et al., Structural journey of an insecticidal protein against western corn rootworm. Nat Commun (2023)

Release Date

2023-05-31

Peptides

Mpf2Ba1: ABCDEFGHIJKLMNOPQRSTUV

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
D

D
E

E
F

F
G

G
H

H
I

I
J

J
K

K
L

L
M

M
N

N
O

O
P

P
Q

Q
R

R
S

S
T

T
U

U
V

V
W

Mpf2Ba1

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