SMTL ID : 8b9e.1

Crystal structure of JAK2 JH2-V617F in complex with Z902-A3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: K.72, W.124 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.72 GOL.2: 3 residues within 4Å: Chain A: K.72, R.148, F.159 No protein-ligand interaction detected (PLIP)

1 x Q7F: 6-[[methyl-[(3-methylthiophen-2-yl)methyl]amino]methyl]-~{N}4-phenyl-1,3,5-triazine-2,4-diamine(Non-covalent)

Q7F.3: 19 residues within 4Å: Chain A: L.16, G.17, Q.18, I.24, L.44, K.46, V.75, Q.91, E.92, F.93, V.94, K.95, F.96, G.97, S.98, K.142, N.143, L.145, S.163 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.24 Hydrogen bonds: A:E.92, A:V.94, A:V.94 Water bridges: A:K.46, A:S.98, A:D.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Virtanen, A.T. et al., Identification of Novel Small Molecule Ligands for JAK2 Pseudokinase Domain. Pharmaceuticals (2023)

Release Date

2023-02-01

Peptides

Tyrosine-protein kinase JAK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase JAK2

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