SMTL ID : 8b9i.1

Cryo-EM structure of MLE in complex with ADP:AlF4 and UUC RNA

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain A: F.380, L.384, T.409, G.410, C.411, G.412, K.413, T.414, T.415, R.452, T.725, D.727, R.771, V.772 Ligands: MG.2, ALF.3 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:G.410, A:G.410, A:C.411, A:G.412, A:K.413, A:T.414, A:T.415, A:T.415, A:R.452, A:D.727, A:R.771 Water bridges: A:R.452, A:T.725 Salt bridges: A:K.413, A:R.771, A:R.771 pi-Cation interactions: A:R.452

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: T.414, V.449, S.723 Ligands: ADP.1, ALF.3 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.723, H2O.1

1 x ALF: TETRAFLUOROALUMINATE ION(Non-covalent)

ALF.3: 11 residues within 4Å: Chain A: T.409, G.410, K.413, D.507, E.508, S.723, Q.764, R.768, R.771 Ligands: ADP.1, MG.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jagtap, P.K.A. et al., Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless. Mol.Cell (2023)

Release Date

2023-10-18

Peptides

Dosage compensation regulator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dosage compensation regulator

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