SMTL ID : 8bbw.1

Crystal structure of medical leech destabilase (low salt)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: E.14, Y.35, Q.36, Y.41, H.92, N.93, Y.107 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.35, A:N.93 Water bridges: A:K.38 GOL.2: 6 residues within 4Å: Chain A: G.49, G.50, S.54, C.55, N.58, C.61 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.50, A:S.54

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: T.84, C.85, Q.86 Ligand excluded by PLIP CL.4: 2 residues within 4Å: Chain A: S.102, A.103 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marin, E. et al., Structural basis for inhibition of thrombolytic destabilasefrom medical leech by physiological sodium concentrations. To Be Published

Release Date

2023-02-08

Peptides

Lysozyme: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme

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