SMTL ID : 8bea.1

Crystal structure of SOS1-HRas-peptidomimetic10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

hetero-1-1-mer

Ligands

1 x VDE- 7XC- HIS- PRO- TRP- SER- VAL: SOS1-HRas-peptidomimetic10(Non-covalent)

VDE-7XC-HIS-PRO-TRP-SER-VAL.1: 13 residues within 4Å: Chain B: M.336, N.337, Y.342, D.345, F.348, S.353, K.356, K.357, L.359, E.360, H.363, E.364, E.367 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:M.336, B:Y.342, B:Y.342, B:F.348, B:L.359, B:L.359, B:H.363 Hydrogen bonds: B:Y.342, B:K.356, B:E.360, B:E.367, B:E.367 Water bridges: B:E.360, B:E.364, B:E.367 Salt bridges: B:E.364, B:E.367

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Van Holsbeeck, K. et al., Nanobody Loop Mimetics Enhance Son of Sevenless 1-Catalyzed Nucleotide Exchange on RAS. Angew.Chem.Int.Ed.Engl. (2023)

Release Date

2023-04-26

Peptides

GTPase HRas: A
Son of sevenless homolog 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
S

GTPase HRas

Son of sevenless homolog 1

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