SMTL ID : 8bi2.1

Syk kinase domain in complex with macrocyclic inhibitor 20a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

monomer

Ligands

1 x QR7: 10,13,23-trimethyl-16-oxa-2,4,8,9,13,19,23,30-octazapentacyclo[19.5.2.1^{3,7}.1^{8,11}.0^{24,28}]triaconta-1(27),3,5,7(30),9,11(29),21,24(28),25-nonaen-20-one(Non-covalent)

QR7.1: 15 residues within 4Å: Chain A: L.35, G.36, V.43, A.58, E.78, M.106, E.107, M.108, A.109, G.112, P.113, R.156, N.157, L.159, D.170 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.35, A:A.58, A:L.159, A:L.159 Hydrogen bonds: A:A.109, A:A.109 Water bridges: A:D.170 Salt bridges: A:D.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grimster, N.P. et al., Optimization of a series of novel, potent and selective Macrocyclic SYK inhibitors. Bioorg.Med.Chem.Lett. (2023)

Release Date

2023-06-14

Peptides

Tyrosine-protein kinase SYK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase SYK

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