SMTL ID : 8bjt.1

Structure of human PLK1 in complex with 2-Allyl-1-[6-(1-hydroxy-1-methyl-ethyl)-pyridin-2-yl]-6-[4-(4-methyl-piperazin-1-yl)-phenylamino]-1,2-dihydro-pyrazolo[3,4-d]pyrimidin-3-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: L.103, K.142, L.143, G.144, N.180, Y.181 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.103 Hydrogen bonds: A:L.143, A:G.144 Water bridges: A:N.180, A:Y.181

1 x 8X7: 1-[6-(2-hydroxypropan-2-yl)pyridin-2-yl]-6-{[4-(4-methylpiperazin-1-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo[3,4-d]pyrimidin-3-one(Non-covalent)

8X7.2: 14 residues within 4Å: Chain A: L.23, G.24, G.26, C.31, A.44, K.46, V.78, L.94, E.95, L.96, C.97, R.100, G.144, F.147 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.23, A:L.23, A:A.44, A:K.46, A:L.94, A:R.100, A:R.100 Hydrogen bonds: A:C.97, A:C.97 pi-Stacking: A:F.147, A:F.147

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 2 residues within 4Å: Chain A: H.57, C.176 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.57, A:C.176, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guler, S. et al., Selective Wee1 Inhibitors Led to Antitumor Activity In Vitro and Correlated with Myelosuppression. Acs Med.Chem.Lett. (2023)

Release Date

2023-04-26

Peptides

Serine/threonine-protein kinase PLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase PLK1

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