SMTL ID : 8bk4.1

Full length structure of the apo-state LpMIP.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.34 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: P.28, D.29, A.30, V.31, K.32, E.159, R.162 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:P.28, A:A.30, A:R.162

1 x WRL: (1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-(hydroxymethyl)-3-[(1~{S})-1-pyridin-2-ylethyl]-3,10-diazabicyclo[4.3.1]decan-2-one(Non-covalent)

WRL.2: 16 residues within 4Å: Chain A: Y.61, F.71, D.72, R.77, F.83, E.87, V.88, I.89, W.92, Y.115, G.120, G.121, M.123, I.124, L.130, F.132 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.61, A:F.71, A:D.72, A:F.83, A:F.83, A:V.88, A:W.92, A:W.92, A:Y.115, A:Y.115, A:I.124 Hydrogen bonds: A:D.72, A:R.77, A:I.89, A:Y.115

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: K.14, Y.111, V.117, Y.127 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.127, A:Y.127

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wiedemann, C. et al., Legionella pneumophila macrophage infectivity potentiator protein appendage domains modulate protein dynamics and inhibitor binding. Int.J.Biol.Macromol. (2023)

Release Date

2023-09-06

Peptides

Macrophage infectivity potentiator: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Macrophage infectivity potentiator