SMTL ID : 8bk6.1

A truncated structure of LpMIP with bound inhibitor JK095.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-dimer

Ligands

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 4 residues within 4Å: Chain A: L.36, I.37, D.38, E.99 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.38 PEG.2: 5 residues within 4Å: Chain A: E.31, E.46, K.104, H.106 Ligands: MES.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.31, A:K.104 Water bridges: A:T.75 PEG.4: 3 residues within 4Å: Chain B: E.31, H.106, I.108 1 PLIP interactions: 1 interactions with chain B Water bridges: B:H.106 PEG.5: 3 residues within 4Å: Chain B: I.37, P.97, E.99 No protein-ligand interaction detected (PLIP)

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 4 residues within 4Å: Chain A: E.31, H.106, I.108 Ligands: PEG.2 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wiedemann, C. et al., Legionella pneumophila macrophage infectivity potentiator protein appendage domains modulate protein dynamics and inhibitor binding. Int.J.Biol.Macromol. (2023)

Release Date

2023-09-06

Peptides

Peptidyl-prolyl cis-trans isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peptidyl-prolyl cis-trans isomerase