SMTL ID : 8bs5.1

Crystal structure of YTHDF3 YTH domain open conformation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 3 residues within 4Å: Chain A: H.74, K.77, R.78 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.78 Salt bridges: A:H.74, A:R.78

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 4 residues within 4Å: Chain A: K.53, N.99, R.164, D.165 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.164, A:D.165

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bedi, R.K. et al., Crystal structure of YTHDF3 YTH domain open conformation. To Be Published

Release Date

2023-12-13

Peptides

YTH domain-containing family protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

YTH domain-containing family protein 3