SMTL ID : 8bvs.1

Cryo-EM structure of rat SLC22A6 bound to tenofovir

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x TFO: [2-(6-AMINO-9H-PURIN-9-YL)-1-METHYLETHOXY]METHYLPHOSPHONIC ACID(Non-covalent)

TFO.1: 4 residues within 4Å: Chain A: Y.230, S.350, Y.354, F.438 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.354 pi-Stacking: A:F.438

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 2 residues within 4Å: Chain A: S.462, R.466 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parker, J.L. et al., Molecular basis for selective uptake and elimination of organic anions in the kidney by OAT1. Nat.Struct.Mol.Biol. (2023)

Release Date

2023-07-19

Peptides

Solute carrier family 22 member 6: A
Synthetic nanobody (Sybody): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Solute carrier family 22 member 6

Synthetic nanobody (Sybody)

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