SMTL ID : 8bz3.1

Structure od the carbohydrate reconition domain of Gal3 in comples with SAF-2-010

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.31 Å

Oligo State

monomer

Ligands

1 x SQR: [(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-2-(hydroxymethyl)-6-(4-nitrophenoxy)-4-oxidanyl-oxan-3-yl]oxy-6-(hydroxymethyl)-3,5-bis(oxidanyl)oxan-4-yl] hydrogen sulfate(Non-covalent)

SQR.1: 8 residues within 4Å: Chain A: H.53, N.55, R.57, V.67, N.69, W.76, E.79, R.81 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:R.57, A:R.57, A:N.69, A:R.81 Water bridges: A:R.39, A:R.39, A:D.43, A:N.55 Salt bridges: A:R.39, A:H.53, A:R.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abdullayev, S. et al., Selectively Modified Lactose and N -Acetyllactosamine Analogs at Three Key Positions to Afford Effective Galectin-3 Ligands. Int J Mol Sci (2023)

Release Date

2023-03-01

Peptides

Galectin-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-3