SMTL ID : 8c0c.1

X-ray crystal structure of PPAR gamma ligand binding domain in complex with CZ46

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

1 x T0C: (2~{R})-2-[4-(naphthalen-1-ylmethoxy)phenyl]-4-oxidanyl-3-phenyl-2~{H}-furan-5-one(Non-covalent)

T0C.1: 16 residues within 4Å: Chain B: F.53, L.55, I.108, G.111, C.112, R.115, A.119, E.122, I.153, M.156, L.157, L.160, L.167, I.168, S.169, M.191 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:F.53, B:L.55, B:I.108, B:R.115, B:A.119, B:I.153, B:I.153, B:L.160, B:I.168 Hydrogen bonds: B:S.169 pi-Cation interactions: B:R.115

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Capelli, D. et al., Biological Screening and Crystallographic Studies of Hydroxy gamma-Lactone Derivatives to Investigate PPAR gamma Phosphorylation Inhibition. Biomolecules (2023)

Release Date

2023-04-26

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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