SMTL ID : 8c0m.1

Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant Y220F

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: R.62, Q.108, H.110, P.115, K.202, F.206 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.206 Water bridges: A:Q.108 Salt bridges: A:R.62, A:H.110

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: Q.47, V.93, P.95, R.218, K.220 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Q.47 Water bridges: A:A.161, A:R.218, A:K.220, A:K.220, A:K.220, A:K.220 Salt bridges: A:R.218, A:K.220 SO4.3: 4 residues within 4Å: Chain A: K.20, Q.22, R.66, E.75 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.22 Water bridges: A:Y.200, A:Y.200 Salt bridges: A:K.20, A:R.66 SO4.4: 3 residues within 4Å: Chain A: P.115, R.141, F.151 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.118, A:R.118, A:R.118, A:R.118 Salt bridges: A:R.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wilkens, C., Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant Y220F. To Be Published

Release Date

2023-12-27

Peptides

Alginate lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alginate lyase

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