- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- hetero-2-1-mer
- Ligands
- 2 x 3PO: TRIPHOSPHATE(Non-covalent)
- 11 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 8 residues within 4Å:- Chain A: W.237, D.238, P.366, A.367, D.368, F.374, V.375, H.378
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:D.238, A:A.367, A:D.368, A:V.375, A:V.375
GOL.3: 6 residues within 4Å:- Chain A: K.71, R.75, D.251, N.254, I.255, E.258
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:E.258
- Water bridges: A:K.65, A:K.71, A:D.251, A:N.254
GOL.4: 9 residues within 4Å:- Chain A: Y.81, R.84, P.209, G.212, N.312, L.328, Y.331, T.332, M.333
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:L.328, A:M.333, A:M.333
- Water bridges: A:R.84, A:T.332, A:T.332
GOL.5: 4 residues within 4Å:- Chain A: I.98, E.144, L.147, E.151
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.144
GOL.8: 9 residues within 4Å:- Chain B: Y.81, R.84, P.209, Q.210, G.212, N.312, L.328, Y.331, M.333
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:R.84, B:P.209, B:N.312, B:L.328, B:M.333
- Water bridges: B:R.84
GOL.9: 7 residues within 4Å:- Chain B: R.320, Y.323, E.324, G.325, V.326, E.327
- Chain C: R.16
10 PLIP interactions:8 interactions with chain B, 2 interactions with chain C- Hydrogen bonds: B:R.320, B:Y.323, B:G.325, B:V.326, B:E.327, C:R.16, C:R.16
- Water bridges: B:R.76, B:R.76, B:R.76
GOL.10: 3 residues within 4Å:- Chain B: E.258, R.262, E.272
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.75, B:E.272
GOL.11: 8 residues within 4Å:- Chain B: W.237, D.238, P.366, A.367, D.368, F.374, V.375, H.378
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:D.238, B:D.238, B:A.367, B:D.368, B:V.375, B:V.375
GOL.12: 5 residues within 4Å:- Chain B: F.34, I.167, K.387, A.410, I.411
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:K.387
- Water bridges: B:I.167, B:I.167
GOL.13: 5 residues within 4Å:- Chain B: K.71, R.75, N.254, I.255, E.258
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:K.71, B:K.71, B:N.254, B:E.258
- Water bridges: B:R.75, B:D.251
GOL.14: 3 residues within 4Å:- Chain B: R.321, P.355, S.359
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.321, B:R.321
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.6: 4 residues within 4Å:- Chain A: M.111, E.112, R.128, I.189
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:M.111, A:E.112
- Water bridges: A:D.109, A:R.128
- Salt bridges: A:R.128
ACT.15: 5 residues within 4Å:- Chain B: M.111, E.112, R.128, I.189, R.193
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:I.189
- Hydrogen bonds: B:E.112
- Water bridges: B:T.115
- Salt bridges: B:R.128
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ferrer-Orta, C. et al., Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes. Plos Pathog. (2023)
- Release Date
- 2023-04-26
- Peptides
- RNA-directed RNA polymerase 3D-POL: AB
Protein 3B-1: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- hetero-2-1-mer
- Ligands
- 2 x 3PO: TRIPHOSPHATE(Non-covalent)
- 11 x GOL: GLYCEROL(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ferrer-Orta, C. et al., Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes. Plos Pathog. (2023)
- Release Date
- 2023-04-26
- Peptides
- RNA-directed RNA polymerase 3D-POL: AB
Protein 3B-1: C - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C