SMTL ID : 8c5l.1

NR2F6 ligand binding domain in complex with NSD1 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 16 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, R.345 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:W.63, A:D.66, A:R.67, A:E.154, A:E.154, A:Y.156, A:R.345 GLC-GLC.2: 16 residues within 4Å: Chain C: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, R.345 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.67, C:Y.156, C:W.341, C:R.345

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oerlemans, G.J.M. et al., Structural insights into coregulator recruitment to the autorepressed NR2F6 nuclear receptor. To Be Published

Release Date

2024-01-10

Peptides

Maltose/maltodextrin-binding periplasmic protein,Nuclear receptor subfamily 2 group F member 6: AC
Histone-lysine N-methyltransferase, H3 lysine-36 specific: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

Maltose/maltodextrin-binding periplasmic protein,Nuclear receptor subfamily 2 group F member 6

Histone-lysine N-methyltransferase, H3 lysine-36 specific