SMTL ID : 8c5y.1

RPA tetrameric supercomplex from Pyrococcus abyssi

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.35 Å

Oligo State

hetero-4-4-4-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.37, C.40, C.55, H.58 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.37, A:C.40, A:C.55, A:H.58 ZN.2: 5 residues within 4Å: Chain D: C.37, E.39, C.40, C.55, H.58 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.37, D:C.40, D:C.55, D:H.58 ZN.3: 4 residues within 4Å: Chain G: C.37, C.40, C.55, H.58 5 PLIP interactions: 5 interactions with chain G Metal complexes: G:C.37, G:C.40, G:C.55, G:H.58, G:H.58 ZN.4: 5 residues within 4Å: Chain J: C.37, C.40, C.55, E.57, H.58 4 PLIP interactions: 4 interactions with chain J Metal complexes: J:C.37, J:C.40, J:C.55, J:H.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Madru, C. et al., DNA-binding mechanism and evolution of replication protein A. Nat Commun (2023)

Release Date

2023-05-03

Peptides

Replication factor A: ADGJ
RPA32 subunit of the hetero-oligomeric complex involved in homologous recombination: BEHK
RPA14 subunit of the hetero-oligomeric complex involved in homologous recombination: CFIL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
D

G
G

J
J

B
B

E
E

H
H

K
K

C
C

F
F

I
I

L
L

Replication factor A

RPA32 subunit of the hetero-oligomeric complex involved in homologous recombination

RPA14 subunit of the hetero-oligomeric complex involved in homologous recombination

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