SMTL ID : 8c6a.1

Light SFX structure of D.m(6-4)photolyase at 1ps time delay

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: F.240, K.242, T.254, T.255, V.256, L.257, S.258, L.261, L.292, Q.295, L.296, W.298, R.299, Y.302, W.358, I.359, H.361, R.364, H.365, A.368, F.387, L.391, D.393, Q.394, D.395, L.398, N.399, N.402, W.403, L.406 Ligands: GOL.2 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:R.364, A:A.368, A:F.387, A:F.387, A:N.402, A:W.403, A:L.406 Hydrogen bonds: A:K.242, A:T.254, A:T.255, A:T.255, A:V.256, A:L.257, A:S.258, A:S.258, A:H.361, A:R.364, A:D.393, A:D.395, A:N.402, A:N.402 Water bridges: A:Q.295, A:H.361 Salt bridges: A:K.242, A:K.242 pi-Cation interactions: A:R.364, A:R.364

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: W.298, Y.302, H.361, H.365, N.402, W.405, L.406 Ligands: FAD.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.402 Water bridges: A:H.361

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cellini, A. et al., Femtosecond serial crystallography resolves conformational changes which guide long-range electron transfer in a photolyase. To Be Published

Release Date

2023-11-01

Peptides

Cryptochrome-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cryptochrome-1

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