SMTL ID : 8c6d.1

Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate.

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x SQS: (2S,3R,4E)-2-aminooctadec-4-ene-1,3-diol(Non-covalent)

SQS.1: 18 residues within 4Å: Chain A: I.111, D.112, I.113, T.114, F.135, F.137, Y.153, F.155, P.177, S.178, V.179, V.192, M.195, Y.201, W.203, N.228, F.233 Chain C: I.24 20 PLIP interactions: 19 interactions with chain A, 1 interactions with chain C Hydrophobic interactions: A:I.111, A:I.111, A:F.135, A:F.135, A:F.137, A:F.155, A:F.155, A:P.177, A:V.179, A:V.192, A:Y.201, A:Y.201, A:W.203, A:N.228, A:F.233, A:F.233, C:I.24 Hydrogen bonds: A:I.111, A:I.113, A:N.228

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kingston, N.J. et al., Production of antigenically stable enterovirus A71 virus-like particles in Pichia pastoris as a vaccine candidate. Biorxiv (2023)

Release Date

2023-02-22

Peptides

Genome polyprotein: A
Genome polyprotein (Fragment): B
Genome polyprotein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Genome polyprotein

Genome polyprotein (Fragment)

Genome polyprotein