SMTL ID : 8cd3.1

Crystal structure of human Scribble PDZ1 domain in complex with human TMIGD1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x ASP- PRO- HIS- SER- GLU- THR- ALA- LEU: Transmembrane and immunoglobulin domain-containing protein 1(Non-covalent)

ASP-PRO-HIS-SER-GLU-THR-ALA-LEU.1: 17 residues within 4Å: Chain A: G.23, L.24, G.25, I.26, S.27, I.28, A.29, G.30, G.33, S.34, T.35, S.47, R.48, H.79, V.83, L.86, R.87 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.83, A:L.86 Hydrogen bonds: A:L.24, A:G.25, A:I.26, A:I.26, A:I.28, A:I.28, A:G.30, A:T.35, A:T.35, A:T.35, A:H.79 Water bridges: A:S.27 Salt bridges: A:R.48 ASP-PRO-HIS-SER-GLU-THR-ALA-LEU.2: 17 residues within 4Å: Chain B: G.23, L.24, G.25, I.26, S.27, I.28, A.29, G.30, G.33, S.34, T.35, S.47, R.48, H.79, V.83, L.86, R.87 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:V.83, B:L.86 Hydrogen bonds: B:L.24, B:G.25, B:I.26, B:I.26, B:I.26, B:I.28, B:I.28, B:G.30, B:T.35, B:T.35, B:S.47, B:H.79 Water bridges: B:S.27 Salt bridges: B:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thuring, E.M. et al., Membrane recruitment of the polarity protein Scribble by the cell adhesion receptor TMIGD1. Commun Biol (2023)

Release Date

2024-01-31

Peptides

Protein scribble homolog: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Protein scribble homolog