- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x O: OXYGEN ATOM(Non-covalent)
O.3: 8 residues within 4Å:- Chain A: N.193, E.200, K.382, R.416
- Ligands: MGD.1, MGD.2, 4MO.4, UJI.9
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.193, A:K.382, A:R.416
O.19: 8 residues within 4Å:- Chain C: N.193, E.200, K.382, R.416
- Ligands: MGD.17, MGD.18, 4MO.20, UJI.26
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:N.193, C:K.382, C:R.416
- 2 x 4MO: MOLYBDENUM(IV) ION(Non-covalent)
- 2 x F3S: FE3-S4 CLUSTER(Non-covalent)
F3S.5: 11 residues within 4Å:- Chain A: C.18, F.20, C.21, G.24, C.25, Y.27, S.96, R.98, G.99, T.237, N.238
3 PLIP interactions:3 interactions with chain A,- Metal complexes: A:C.18, A:C.21, A:C.25
F3S.21: 11 residues within 4Å:- Chain C: C.18, F.20, C.21, G.24, C.25, Y.27, S.96, R.98, G.99, T.237, N.238
3 PLIP interactions:3 interactions with chain C,- Metal complexes: C:C.18, C:C.21, C:C.25
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.6: 9 residues within 4Å:- Chain A: T.132, D.134, H.135, A.138, T.489
- Chain C: V.804, G.805, S.806
- Ligands: PO4.11
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain C- Hydrogen bonds: A:T.132, A:H.135, A:T.489, C:S.806, C:S.806
- Water bridges: A:W.133, A:T.489
PEG.23: 8 residues within 4Å:- Chain A: V.804, G.805, S.806
- Chain C: T.132, D.134, H.135, A.138, T.489
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain C- Hydrogen bonds: A:S.806, C:T.132, C:H.135, C:T.489
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.7: 3 residues within 4Å:- Chain A: K.330, G.331, F.332
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:G.331, A:F.332
- Water bridges: A:D.333, A:D.334
- Salt bridges: A:K.330
PO4.11: 4 residues within 4Å:- Chain A: T.488, T.489
- Chain C: R.802
- Ligands: PEG.6
7 PLIP interactions:1 interactions with chain C, 6 interactions with chain A- Salt bridges: C:R.802
- Hydrogen bonds: A:T.489, A:T.489
- Water bridges: A:H.135, A:H.135, A:T.488, A:E.490
PO4.24: 3 residues within 4Å:- Chain C: K.330, G.331, F.332
8 PLIP interactions:8 interactions with chain C- Hydrogen bonds: C:G.331, C:F.332
- Water bridges: C:T.329, C:K.330, C:D.333, C:D.333, C:D.333
- Salt bridges: C:K.330
- 1 x GOL: GLYCEROL(Non-functional Binders)
- 2 x UJI: tetrakis(oxidanyl)antimony(Non-covalent)
UJI.9: 12 residues within 4Å:- Chain A: H.163, H.192, N.193, E.200, R.416, G.419, H.420, E.422
- Ligands: MGD.1, MGD.2, O.3, 4MO.4
11 PLIP interactions:10 interactions with chain A, 1 Ligand-Ligand interactions- Hydrogen bonds: A:H.192, A:N.193, A:E.200, A:K.382, A:R.416, A:R.416, A:G.419, A:H.420, A:H.420
- Water bridges: A:R.194
- Metal complexes: O.3
UJI.26: 11 residues within 4Å:- Chain C: H.163, H.192, N.193, E.200, R.416, G.419, H.420
- Ligands: MGD.17, MGD.18, O.19, 4MO.20
9 PLIP interactions:8 interactions with chain C, 1 Ligand-Ligand interactions- Hydrogen bonds: C:N.193, C:E.200, C:R.416, C:R.416, C:G.419, C:H.420
- Water bridges: C:R.194, C:E.422
- Metal complexes: O.19
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.10: 5 residues within 4Å:- Chain A: F.260, R.375, R.409, R.410
- Ligands: EDO.12
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:R.375, A:R.375, A:R.410
EDO.12: 3 residues within 4Å:- Chain A: F.260, R.375
- Ligands: EDO.10
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.375
- Water bridges: A:R.410
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.16: 9 residues within 4Å:- Chain B: C.60, H.62, M.63, G.64, C.65, C.78, H.81, F.82, T.83
3 PLIP interactions:3 interactions with chain B,- Metal complexes: B:C.60, B:C.78, B:H.81
FES.29: 9 residues within 4Å:- Chain D: C.60, H.62, M.63, G.64, C.65, C.78, H.81, F.82, T.83
3 PLIP interactions:3 interactions with chain D,- Metal complexes: D:C.60, D:C.78, D:H.81
- 1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.25: 5 residues within 4Å:- Chain C: D.151, Q.154, G.155, G.446, R.447
4 PLIP interactions:4 interactions with chain C- Hydrophobic interactions: C:D.151
- Hydrogen bonds: C:G.446
- Water bridges: C:R.447
- Salt bridges: C:R.447
ACT.27: 3 residues within 4Å:- Chain A: R.802
- Chain C: T.488, T.489
6 PLIP interactions:3 interactions with chain C, 3 interactions with chain A- Hydrogen bonds: C:T.489
- Water bridges: C:T.489, C:T.489, A:R.802, A:R.802
- Salt bridges: A:R.802
- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Engrola, F. et al., Arsenite oxidase in complex with antimonite and arsenite oxyanions: Insights into the catalytic mechanism. J.Biol.Chem. (2023)
- Release Date
- 2023-07-12
- Peptides
- Arsenite oxidase subunit AioA: AC
AioB: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EC
GB
FD
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 4 x MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE(Non-covalent)
- 2 x O: OXYGEN ATOM(Non-covalent)
- 2 x 4MO: MOLYBDENUM(IV) ION(Non-covalent)
- 2 x F3S: FE3-S4 CLUSTER(Non-covalent)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
- 1 x GOL: GLYCEROL(Non-functional Binders)
- 2 x UJI: tetrakis(oxidanyl)antimony(Non-covalent)
- 2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Engrola, F. et al., Arsenite oxidase in complex with antimonite and arsenite oxyanions: Insights into the catalytic mechanism. J.Biol.Chem. (2023)
- Release Date
- 2023-07-12
- Peptides
- Arsenite oxidase subunit AioA: AC
AioB: BD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
EC
GB
FD
H