SMTL ID : 8chx.1

Structure and function of LolA from Vibrio cholerae

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: D.82, E.83, D.97 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.82, A:D.82, A:D.97, H2O.1, H2O.2 ZN.2: 1 residues within 4Å: Chain A: H.132 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.132 ZN.3: 2 residues within 4Å: Chain A: E.77, E.79 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.77, A:E.79, H2O.4, H2O.6 ZN.4: 1 residues within 4Å: Chain A: E.35 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.35 ZN.5: 2 residues within 4Å: Chain A: E.101, K.200 No protein-ligand interaction detected (PLIP) ZN.6: 6 residues within 4Å: Chain B: F.74, R.75, W.76, L.86, V.87, S.88 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:F.74, B:L.86 ZN.7: 2 residues within 4Å: Chain B: Q.207, N.209 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaiman, D. et al., A comparative analysis of lipoprotein transport proteins: LolA and LolB from Vibrio cholerae and LolA from Porphyromonas gingivalis. Sci Rep (2023)

Release Date

2023-06-21

Peptides

Outer-membrane lipoprotein carrier protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Outer-membrane lipoprotein carrier protein