SMTL ID : 8cis.1

The FERM domain of human moesin with two bound peptides identified by phage display

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.52 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ALA- ALA- ALA- ALA- ALA- GLY: Unknown peptide(Non-covalent)

ALA-ALA-ALA-ALA-ALA-GLY.1: 6 residues within 4Å: Chain A: D.14, A.15, E.16, L.17, E.18, F.19 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:A.15, A:F.19 Hydrogen bonds: A:D.14, A:E.16, A:E.16, A:E.18, A:E.18

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 3 residues within 4Å: Chain A: R.82, Q.106, E.109 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Q.106 Hydrogen bonds: A:E.109 Water bridges: A:Q.106 Salt bridges: A:R.82 ACT.3: 5 residues within 4Å: Chain A: N.211, L.217, K.238, I.239, F.270 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.270 Hydrogen bonds: A:N.211 Salt bridges: A:K.238 ACT.4: 3 residues within 4Å: Chain A: R.247, N.248, K.259 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:K.259 Hydrogen bonds: A:N.248 Water bridges: A:R.247 Salt bridges: A:R.247, A:K.259

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.5: 6 residues within 4Å: Chain A: Y.117, P.119, P.120, R.157, Q.161, H.162 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.161 Salt bridges: A:R.157, A:H.162 SO4.6: 4 residues within 4Å: Chain A: R.294 Chain B: W.6, F.12, E.13 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Water bridges: A:R.294, A:R.294, A:R.294, A:R.294 Salt bridges: A:R.294 Hydrogen bonds: B:A.11, B:E.13 SO4.7: 3 residues within 4Å: Chain A: R.274, L.275, R.276 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.276 Water bridges: A:L.275 Salt bridges: A:R.274, A:R.276

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.8: 3 residues within 4Å: Chain A: D.97, I.98, R.101 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.101, A:R.101 Water bridges: A:I.38, A:I.98 EDO.9: 3 residues within 4Å: Chain A: R.41, Q.96, Q.309 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.41, A:Q.96, A:Q.309 EDO.10: 3 residues within 4Å: Chain A: K.134, Y.135, R.185 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, Y. et al., Discovery of FERM domain protein-protein interaction inhibitors for MSN and CD44 as a potential therapeutic approach for Alzheimer's disease. J.Biol.Chem. (2023)

Release Date

2023-03-01

Peptides

Moesin: A
C3P: B
C3S1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Moesin

C3P

C3S1

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