- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x TEP: THEOPHYLLINE(Non-covalent)
TEP.3: 11 residues within 4Å:- Chain A: L.14, T.35, V.37, T.38, W.70, T.77, F.79, W.97, L.99, N.118
- Chain C: W.110
5 PLIP interactions:2 interactions with chain C, 3 interactions with chain A- pi-Stacking: C:W.110, C:W.110
- Hydrogen bonds: A:V.37, A:T.77
- Water bridges: A:T.38
TEP.7: 8 residues within 4Å:- Chain B: L.14, W.70, T.77, F.79, W.97, L.99, N.118
- Chain D: W.110
2 PLIP interactions:2 interactions with chain D- pi-Stacking: D:W.110, D:W.110
TEP.10: 11 residues within 4Å:- Chain A: W.110
- Chain C: L.14, T.35, V.37, T.38, W.70, T.77, F.79, W.97, L.99, N.118
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain A- Hydrogen bonds: C:V.37, C:T.77
- Water bridges: C:T.38
- pi-Stacking: A:W.110, A:W.110
TEP.14: 8 residues within 4Å:- Chain B: W.110
- Chain D: L.14, W.70, T.77, F.79, W.97, L.99, N.118
2 PLIP interactions:2 interactions with chain B- pi-Stacking: B:W.110, B:W.110
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 5 residues within 4Å:- Chain A: R.2, K.90, E.91, R.122, R.124
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:E.91, A:E.91
- Salt bridges: A:R.2, A:K.90, A:R.124
SO4.5: 3 residues within 4Å:- Chain A: A.1, R.2
- Ligands: GOL.1
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:A.1
SO4.11: 5 residues within 4Å:- Chain C: R.2, K.90, E.91, R.122, R.124
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:E.91, C:E.91
- Salt bridges: C:R.2, C:K.90, C:R.124
SO4.12: 3 residues within 4Å:- Chain C: A.1, R.2
- Ligands: GOL.8
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:A.1
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Spinello, A. et al., The avidin-theophylline complex: A structural and computational study. Proteins (2023)
- Release Date
- 2023-12-27
- Peptides
- Avidin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x TEP: THEOPHYLLINE(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Spinello, A. et al., The avidin-theophylline complex: A structural and computational study. Proteins (2023)
- Release Date
- 2023-12-27
- Peptides
- Avidin: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B