SMTL ID : 8ckh.1

Crystal structure of IspE from Klebsiella pneumoniae

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 22 residues within 4Å: Chain A: V.58, V.61, E.65, N.66, L.67, I.68, K.97, M.101, G.102, G.103, G.104, L.105, G.106, G.107, G.108, S.109, N.111, I.180, P.181, T.182, T.241 Chain B: A.23 19 PLIP interactions: 18 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.66, A:N.66, A:L.67, A:P.100, A:G.102, A:G.103, A:G.104, A:G.106, A:G.106, A:G.107, A:G.108, A:S.109, A:T.182, A:T.182, A:T.241 Water bridges: A:L.105, A:S.109, A:S.109, B:A.23 ANP.2: 23 residues within 4Å: Chain A: A.23 Chain B: K.11, V.58, V.61, E.65, N.66, L.67, I.68, K.97, M.101, G.102, G.103, G.104, L.105, G.106, G.107, G.108, S.109, N.111, I.180, P.181, T.182, G.242 17 PLIP interactions: 2 interactions with chain A, 15 interactions with chain B Hydrogen bonds: A:A.23, B:K.11, B:N.66, B:N.66, B:L.67, B:G.102, B:G.103, B:G.104, B:L.105, B:G.106, B:G.107, B:G.108, B:S.109, B:T.182, B:T.182 Water bridges: A:A.23, B:P.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hamid, R., Crystal structure of IspE from Klebsiella pneumoniae. To Be Published

Release Date

2024-02-28

Peptides

4-diphosphocytidyl-2-C-methyl-D-erythritol kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

4-diphosphocytidyl-2-C-methyl-D-erythritol kinase