SMTL ID : 8ckq.1

Crystal structure of maize cytokinin oxidase/dehydrogenase 4 (CKO/CKX4) in complex with inhibitor 2-[(3,5-dichlorophenyl)carbamoylamino]benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.1: 36 residues within 4Å: Chain A: F.57, A.95, R.96, G.97, H.98, G.99, H.100, S.101, Q.105, A.106, M.116, G.146, T.169, D.170, Y.171, L.174, S.175, G.177, G.178, T.179, S.181, N.182, G.184, I.185, L.230, G.231, G.234, I.235, I.236, W.383, W.389, Y.487, L.488, A.523, Q.526 Ligands: UZX.2 30 PLIP interactions: 30 interactions with chain A Hydrophobic interactions: A:F.57, A:H.100, A:Y.171, A:Y.171, A:L.174, A:W.383, A:W.389 Hydrogen bonds: A:A.95, A:G.97, A:H.98, A:G.99, A:H.100, A:H.100, A:S.101, A:Q.105, A:D.170, A:Y.171, A:S.175, A:S.181, A:N.182, A:G.184, A:I.185, A:I.185, A:I.236, A:I.236, A:Y.487, A:Q.526 Water bridges: A:S.101, A:S.175, A:A.523

1 x UZX: 2-[[3,5-bis(chloranyl)phenyl]carbamoylamino]benzamide(Non-covalent)

UZX.2: 12 residues within 4Å: Chain A: D.170, I.185, V.370, W.389, N.391, P.421, L.423, L.448, L.452, Y.487, L.488 Ligands: FAD.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.370, A:V.370, A:W.389, A:P.421, A:L.452 Hydrogen bonds: A:D.170, A:D.170 Water bridges: A:E.325, A:R.369, A:R.369

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nisler, J. et al., Cytokinin oxidase/dehydrogenase inhibitors: progress toward a practice. To Be Published

Release Date

2024-02-28

Peptides

Cytokinin dehydrogenase 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytokinin dehydrogenase 4

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