SMTL ID : 8cnl.1

Lymphocytic choriomeningitis virus 3'-5' exonuclease domain of nucleoprotein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-octamer

Ligands

8 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.52, A:C.159, A:H.162, A:C.178, A:C.178 ZN.2: 4 residues within 4Å: Chain B: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.52, B:C.159, B:H.162, B:C.178, B:C.178 ZN.3: 4 residues within 4Å: Chain C: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.52, C:C.159, C:H.162, C:C.178, C:C.178 ZN.4: 4 residues within 4Å: Chain D: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.52, D:C.159, D:H.162, D:C.178, D:C.178 ZN.5: 4 residues within 4Å: Chain E: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.52, E:C.159, E:H.162, E:C.178, E:C.178 ZN.6: 4 residues within 4Å: Chain F: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain F Metal complexes: F:E.52, F:C.159, F:H.162, F:C.178, F:C.178 ZN.7: 4 residues within 4Å: Chain G: E.52, C.159, H.162, C.178 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:E.52, G:C.159, G:H.162, G:C.178 ZN.8: 4 residues within 4Å: Chain H: E.52, C.159, H.162, C.178 5 PLIP interactions: 5 interactions with chain H Metal complexes: H:E.52, H:C.159, H:H.162, H:C.178, H:C.178

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Spiliopoulou, M. et al., Lymphocytic choriomeningitis virus 3'-5' exonuclease domain of nucleoprotein. To Be Published

Release Date

2024-09-11

Peptides

Nucleoprotein: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
C

D
D

E
E

F
F

G
G

H
H

Nucleoprotein