SMTL ID : 8cnz.1 (3 other biounits)

mmLarE-[4Fe-4S] phased by Fe-SAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

homo-dimer

Ligands

2 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 8 residues within 4Å: Chain A: F.67, F.68, R.106, C.107, C.110, K.111, C.185 Ligands: CL.3 3 PLIP interactions: 3 interactions with chain A, Metal complexes: A:C.107, A:C.110, A:C.185 SF4.4: 8 residues within 4Å: Chain B: F.67, F.68, R.106, C.107, C.110, K.111, C.185 Ligands: CL.6 3 PLIP interactions: 3 interactions with chain B, Metal complexes: B:C.107, B:C.110, B:C.185

2 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 1 residues within 4Å: Chain A: N.160 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain B: N.160 Ligand excluded by PLIP

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: K.111 Ligands: SF4.1 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain B: K.111 Ligands: SF4.4 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zecchin, P. et al., Structure-based insights into the mechanism of [4Fe-4S]-dependent sulfur insertase LarE. Protein Sci. (2024)

Release Date

2024-01-31

Peptides

NAD_synthase domain-containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

NAD_synthase domain-containing protein

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