SMTL ID : 8cph.1

Crystal structure of PPAR gamma (PPARG) in complex with WY-14643 (inactive form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x WY1: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID(Non-covalent)

WY1.1: 10 residues within 4Å: Chain A: F.64, G.84, C.85, R.88, S.89, I.126, M.129, L.130, L.133, I.141 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.64, A:R.88, A:I.141 Salt bridges: A:R.88 WY1.2: 10 residues within 4Å: Chain B: I.81, G.84, C.85, R.88, S.89, I.126, M.129, L.130, L.133, I.141 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:R.88, B:I.141, B:I.141 Water bridges: B:R.88 Salt bridges: B:R.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arifi, S. et al., Targeting the Alternative Vitamin E Metabolite Binding Site Enables Noncanonical PPAR gamma Modulation. J.Am.Chem.Soc. (2023)

Release Date

2023-07-12

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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