SMTL ID : 8cpi.1

Crystal structure of PPAR gamma (PPARG) in complex with WY-14643

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x WY1: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID(Non-covalent)

WY1.1: 14 residues within 4Å: Chain A: F.82, C.85, R.88, S.89, H.123, I.126, L.130, F.163, M.164, K.167, H.249, L.253, Y.273 Ligands: WY1.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:R.88, A:I.126, A:L.130 Hydrogen bonds: A:S.89, A:S.89 Salt bridges: A:H.123, A:H.249 WY1.2: 14 residues within 4Å: Chain A: I.49, L.55, E.59, F.64, H.66, T.68, R.80, G.84, C.85, R.88, I.141, S.142, M.148 Ligands: WY1.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:E.59, A:F.64, A:F.64 Hydrogen bonds: A:R.80, A:S.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arifi, S. et al., Targeting the Alternative Vitamin E Metabolite Binding Site Enables Noncanonical PPAR gamma Modulation. J.Am.Chem.Soc. (2023)

Release Date

2023-07-12

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peroxisome proliferator-activated receptor gamma

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