SMTL ID : 8cv7.1 (1 other biounit)

Peptide 2.2E in complex with BRD2-BD2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ACE: ACETYL GROUP(Non-functional Binders)

ACE.1: 9 residues within 4Å: Chain A: A.26, W.29, M.97 Chain B: W.1, Y.2, G.3, Y.4, W.5, C.12 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:W.5 Hydrogen bonds: B:G.3, B:Y.4 Water bridges: B:Y.2

1 x NH2: AMINO GROUP(Non-functional Binders)

NH2.2: 3 residues within 4Å: Chain B: K.6, K.11, C.12 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Water bridges: A:D.93, B:C.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Franck, C. et al., Discovery and characterization of cyclic peptides selective for the C-terminal bromodomains of BET family proteins. Structure (2023)

Release Date

2023-05-24

Peptides

Isoform 3 of Bromodomain-containing protein 2: A
Peptide 2.2E: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Isoform 3 of Bromodomain-containing protein 2

Peptide 2.2E

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